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nonstructural_protein_NS3

Euk-Vir

Pseudoplusia_includens_densovirus

nonstructural_protein_NS3__YP_007003822__Pseudoplusia_includens_densovirus__185637

Identity

Accession:: YP_007003822 ↗
Protein ID:: nonstructural_protein_NS3
Kingdom:: euk

Quality

68.9 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Protoambidensovirus› Pseudoplusia_includens_densovirus

TaxID: 185637

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 99-119_137-226

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17530.8 best	NS3	133.8	9.80e-39	84.7%	39.6%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l7eA00	2.60.40.1970	Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain	0.55	30.0	2.97e-01	96.4%	47.2%
1egjA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	34.0	3.55e-01	95.5%	66.3%
4nn5C02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	33.0	3.44e-01	94.6%	64.6%
3lqmA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	31.0	3.24e-01	94.6%	58.8%
2dn7A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	30.0	3.11e-01	81.1%	57.9%
2wraA00	2.60.120.400	Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin	0.51	37.0	3.64e-01	77.5%	100.0%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3975133	11.1.1.210 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZirS_C	0.60	39.0	3.70e-01	95.5%	55.4%
3612328	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.58	35.0	3.52e-01	95.5%	59.1%
3765302	11.1.1.327 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CRLF2-like_D2	0.56	34.0	3.08e-01	95.5%	45.5%
3845950	11.1.1.129 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind	0.55	31.0	3.15e-01	94.6%	52.2%
3939165	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	37.0	3.72e-01	94.6%	69.6%
3805986	2004.1.1.26 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin	0.53	41.0	2.91e-01	82.0%	33.2%
3765436	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.51	39.0	2.75e-01	81.1%	32.5%
3761841	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.51	31.0	3.04e-01	95.5%	54.2%
3595157	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.51	39.0	2.74e-01	81.1%	35.0%

D2 medium residues 20-92

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17530.8 best	NS3	29.3	8.20e-07	100.0%	26.1%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1sqgA01	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.52	45.0	3.71e-01	100.0%	65.2%
2c35A00	1.20.1250.40	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit	0.51	40.0	3.41e-01	93.2%	50.8%