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nonstructural_protein_NS5A
Euk-VirHepacivirus_P
nonstructural_protein_NS5A__YP_009709879__Hepacivirus_P__2202225
Identity
- Accession:
- YP_009709879 ↗
- Protein ID:
- nonstructural_protein_NS5A
- Kingdom:
- euk
Quality
64.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Hepacivirus›
Hepacivirus_P
TaxID: 2202225
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-104
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009664181__Hepacivirus_K__2008770__D43-101
D2
medium
residues 111-193
Domain cluster:
rep: nonstructural_protein_NS5A__YP_009179227_nonstructural_protein_NS5A__Wenling_shark_virus__1746066__D111-203
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fqmA02 | 2.20.25.220 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain | 0.88 | 80.0 | 7.94e-01 | 100.0% | 93.0% |
| 3nvoA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.62 | 32.0 | 2.79e-01 | 89.2% | 31.3% |
| 1lwjA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 31.0 | 3.69e-01 | 98.8% | 96.0% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 3.25e-01 | 96.4% | 50.8% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 29.0 | 3.01e-01 | 100.0% | 55.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 283055 | 926.1.1.2 ↗ | few secondary structure elements › HCV NS5A domain I subdomains › HCV NS5A domain I subdomains › HCV NS5A domain I subdomains › HCV_NS5a_1b | 0.89 | 81.0 | 7.71e-01 | 100.0% | 85.1% |
| 3721757 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 33.0 | 3.66e-01 | 98.8% | 61.5% |
| 5015019 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 34.0 | 3.80e-01 | 100.0% | 96.7% |