nonstructural_protein_NS5B

Euk-Vir

Equine_hepacivirus_JPN3_JAPAN_2013

nonstructural_protein_NS5B__YP_009325391__Equine_hepacivirus_JPN3_JAPAN_2013__1416349

Identity

88.7 mean pLDDT

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Hepacivirus› Equine_hepacivirus_JPN3/JAPAN/2013

TaxID: 1416349

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 367-581

PDB

Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	91.4	7.80e-26	67.9%	27.8%

D2 medium residues 1-58

PDB

Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272689__Hepatitis_C_virus_genotype_7__1544901__D1-52

D3 medium residues 59-83_162-187_221-304

PDB

Domain cluster: rep: nonstructural_protein_NS5B__YP_009179227_nonstructural_protein_NS5B__Wenling_shark_virus__1746066__D171-191_226-287

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	77.0	1.80e-21	65.9%	17.1%

D4 medium residues 188-220_305-365

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	45.9	4.80e-12	66.0%	11.3%
PF00998.29	RdRP_3	35.1	9.20e-09	39.4%	7.2%