nonstructural_protein_NS5B

Euk-Vir

Norway_rat_hepacivirus_1

nonstructural_protein_NS5B__YP_009325401__Norway_rat_hepacivirus_1__1562038

Identity

91.1 mean pLDDT

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Hepacivirus› Norway_rat_hepacivirus_1

TaxID: 1562038

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 390-538

PDB

Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	46.1	4.30e-12	79.9%	19.8%

D2 medium residues 18-60_139-160

PDB

Domain cluster: representative

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3240833	207.1.1.52 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2	0.52	35.0	2.35e-01	70.8%	16.8%
3639201	309.1.1.16 ↗	a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C	0.51	43.0	2.41e-01	100.0%	84.3%

D3 medium residues 61-138_161-187_222-278

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	33.1	3.70e-08	39.5%	11.7%

D4 medium residues 188-221_279-389

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	99.6	2.60e-28	77.2%	22.0%