nonstructural_protein_NS5

Euk-Vir

Spanish_goat_encephalitis_virus

nonstructural_protein_NS5__YP_009163757__Spanish_goat_encephalitis_virus__1691889

Identity

85.4 mean pLDDT

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Orthoflavivirus› Spanish_goat_encephalitis_virus

TaxID: 1691889

View cluster (51 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 710-875

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase_NS5__YP_009268628__Hanko_virus__1125677__D698-878

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF20483.4 best	Flavi_NS5_thumb	232.9	2.60e-69	95.8%	95.1%

D2 medium residues 6-45_183-261

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase_NS5__YP_009329957__Saint_Louis_encephalitis_virus__11080__D147-245

D3 medium residues 46-182

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__NP_740729__Louping_ill_virus__11086__D71-170

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01728.26 best	FtsJ	61.5	1.40e-16	93.4%	66.8%

D4 medium residues 289-318_375-500_553-595

PDB

Domain cluster: rep: NS5-like_protein__YP_009179403__Wuhan_flea_virus__1746071__D315-356_368-395_444-456_471-503_597-617

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00972.26 best	Flavi_NS5	222.8	9.50e-66	64.8%	28.2%
PF00972.26	Flavi_NS5	35.2	7.70e-09	22.6%	9.5%
PF00972.26	Flavi_NS5	34.3	1.50e-08	18.1%	7.8%

D5 medium residues 319-374

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00972.26 best	Flavi_NS5	78.9	4.50e-22	100.0%	12.4%

D6 medium residues 501-552_596-697

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00972.26 best	Flavi_NS5	153.4	1.10e-44	66.9%	22.8%
PF00972.26	Flavi_NS5	61.6	7.90e-17	34.4%	11.5%