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nonstructural_protein
Euk-VirHuman_rotavirus_B
nonstructural_protein__YP_008126853__Human_rotavirus_B__10942
Identity
- Accession:
- YP_008126853 ↗
- Protein ID:
- nonstructural_protein
- Kingdom:
- euk
Quality
63.5
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Sedoreoviridae›
Rotavirus›
Human_rotavirus_B
TaxID: 10942
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 111-170
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17580.8 best | GBR_NSP5 | 34.3 | 2.90e-08 | 100.0% | 32.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3314757 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.64 | 51.0 | 3.60e-01 | 88.3% | 82.1% |
| 3320044 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.54 | 41.0 | 2.65e-01 | 81.7% | 41.4% |