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nonstructural_protein

Euk-Vir

Ungulate_tetraparvovirus_1

nonstructural_protein__YP_009175068__Ungulate_tetraparvovirus_1__1511914

Identity

Accession:: YP_009175068 ↗
Protein ID:: nonstructural_protein
Kingdom:: euk

Quality

76.2 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Tetraparvovirus› Tetraparvovirus_ungulate1

TaxID: 1511914

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-193

PDB

Domain cluster: rep: NS1__YP_009507375__Chipmunk_parvovirus__56820__D1-203

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08724.17 best	Rep_N	37.1	4.10e-09	81.0%	65.0%

D2 medium residues 231-283

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	41.8	9.50e-11	100.0%	18.4%

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1u0jA01	1.10.10.950	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.83	76.0	7.53e-01	100.0%	96.4%
2oyyA00	6.10.80.10	Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP)	0.76	45.0	4.06e-01	92.5%	43.7%
4an8A02	1.10.132.100	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 ›	0.65	49.0	3.74e-01	81.1%	38.5%
1x4tA01	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.64	45.0	4.43e-01	88.7%	69.0%
3hwrA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.63	44.0	3.34e-01	73.6%	88.4%
3fxdB00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	47.0	4.63e-01	92.5%	74.1%
3d36B02	1.10.287.130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain	0.62	45.0	4.35e-01	86.8%	67.2%
2guzB00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.62	54.0	5.07e-01	100.0%	90.8%
1vf7A03	1.10.287.470	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.60	49.0	4.71e-01	88.7%	78.3%
3layF00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.59	45.0	3.99e-01	88.7%	56.4%
6xxvC00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.59	49.0	3.96e-01	98.1%	83.8%
4l8jA04	1.10.287.470	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.59	48.0	4.64e-01	88.7%	79.7%
1t72A02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.57	47.0	3.93e-01	96.2%	83.7%
1f5qB02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.56	49.0	3.66e-01	100.0%	39.1%
1gt0D00	1.10.30.10	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain	0.54	41.0	3.68e-01	84.9%	79.7%
8d8lN01	1.10.287.1480	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.54	37.0	3.19e-01	86.8%	44.2%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
184858	6021.1.1.1 ↗	alpha bundles › Hexameric cytochrome HTHP › Hexameric cytochrome HTHP › Hexameric cytochrome HTHP › HTHP	0.76	45.0	4.06e-01	92.5%	43.7%
3807250	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.65	55.0	5.35e-01	100.0%	96.7%
3686422	621.1.1.0 ↗	alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain	0.64	56.0	4.51e-01	100.0%	58.1%
3495699	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.63	46.0	2.98e-01	77.4%	71.8%
3944325	3711.1.1.20 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444	0.62	47.0	4.10e-01	88.7%	55.0%
4648077	2006.1.6.38 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444	0.61	47.0	2.95e-01	88.7%	16.0%
5005176	604.15.1.0 ↗	alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like	0.53	42.0	4.05e-01	96.2%	81.5%

D3 medium residues 334-402

PDB

Domain cluster: rep: NS1_protein__NP_694863__Human_erythrovirus_V9__72197__D319-372

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	119.4	2.10e-34	100.0%	24.7%
PF00004.36	AAA	21.6	3.50e-04	94.2%	35.1%

D4 medium residues 403-468

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	67.0	1.90e-18	100.0%	23.6%