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nonstructural_protein
Euk-VirSalanga_virus
nonstructural_protein__YP_010086146__Salanga_virus__1416745
Identity
- Accession:
- YP_010086146 ↗
- Protein ID:
- nonstructural_protein
- Kingdom:
- euk
Quality
86.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Phenuiviridae›
Phlebovirus›
Salanga_virus
TaxID: 1416745
Cluster
View cluster (55 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-72
Domain cluster:
rep: nonstructural_protein__YP_009346037__Uriurana_virus__1055750__D4-72
D2
high
residues 89-238
Domain cluster:
rep: nonstructural_protein__YP_009141016__Bhanja_virus__1213620__D62-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11073.14 best | NSs | 34.1 | 3.00e-08 | 97.3% | 49.8% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7pC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.58 | 43.0 | 3.64e-01 | 77.3% | 73.6% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 35.0 | 3.64e-01 | 94.7% | 65.5% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 38.0 | 4.22e-01 | 93.3% | 85.8% |
| 3am6A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 43.0 | 3.80e-01 | 82.7% | 94.6% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 46.0 | 4.09e-01 | 89.3% | 90.5% |
| 4bwcA02 | 1.10.439.20 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Phospholipase B-like, domain 2 | 0.54 | 28.0 | 3.15e-01 | 98.0% | 60.7% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.52 | 31.0 | 3.72e-01 | 88.0% | 90.4% |
| 1xvhB00 | 1.20.120.1850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules) | 0.52 | 27.0 | 2.99e-01 | 84.0% | 58.5% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.52 | 26.0 | 3.00e-01 | 71.3% | 62.4% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 42.0 | 3.84e-01 | 92.7% | 79.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.92 | 65.0 | 7.67e-01 | 77.3% | 100.0% | |
| 4822198 | 1183.1.1.1 ↗ | alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs | 0.90 | 75.0 | 8.14e-01 | 94.7% | 100.0% |
| 2323915 | 1183.1.1.1 ↗ | alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs | 0.90 | 86.0 | 8.30e-01 | 100.0% | 91.0% |
| 3231966 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.63 | 51.0 | 4.15e-01 | 87.3% | 94.2% |
| 3974187 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.56 | 30.0 | 3.78e-01 | 87.3% | 85.6% |
| 3486995 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 38.0 | 4.05e-01 | 76.0% | 98.5% |