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nsP1
Euk-VirBarmah_Forest_virus
nsP1__NP_818995__Barmah_Forest_virus__11020
Identity
- Accession:
- NP_818995 ↗
- Protein ID:
- nsP1
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Togaviridae›
Alphavirus›
Barmah_Forest_virus
TaxID: 11020
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-179_262-299_450-478
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01660.23 best | Vmethyltransf | 53.3 | 3.30e-14 | 71.2% | 41.5% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dcmA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 53.0 | 5.46e-01 | 81.3% | 80.0% |
| 2esrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 53.0 | 5.85e-01 | 81.8% | 95.6% |
| 2jjqA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 50.0 | 5.14e-01 | 80.3% | 75.1% |
| 1i9gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 56.0 | 5.87e-01 | 83.8% | 89.7% |
| 2fpoC00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 53.0 | 5.53e-01 | 82.3% | 85.1% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 52.0 | 5.29e-01 | 81.8% | 78.3% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 53.0 | 5.80e-01 | 84.8% | 96.4% |
| 5wt3A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 53.0 | 5.55e-01 | 80.8% | 87.8% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 54.0 | 5.19e-01 | 82.3% | 74.9% |
| 4qdjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 53.0 | 5.26e-01 | 81.8% | 78.4% |
| 7wm5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 53.0 | 5.23e-01 | 83.3% | 77.8% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 54.0 | 5.34e-01 | 83.3% | 96.1% |
| 2igtA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 52.0 | 4.84e-01 | 81.3% | 77.4% |
| 3futA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 53.0 | 5.35e-01 | 82.8% | 84.9% |
| 2ip2A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 52.0 | 4.82e-01 | 81.3% | 72.8% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 49.0 | 5.43e-01 | 81.3% | 96.2% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 53.0 | 5.51e-01 | 82.8% | 96.2% |
| 1qzzA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 51.0 | 5.52e-01 | 82.3% | 94.1% |
| 3lstA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 52.0 | 4.78e-01 | 81.3% | 70.0% |
| 2p35A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 50.0 | 5.33e-01 | 81.8% | 92.5% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 4.66e-01 | 80.3% | 85.6% |
| 3pg5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 41.0 | 3.62e-01 | 73.2% | 97.3% |
| 6d6zA02 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.51 | 38.0 | 3.65e-01 | 77.8% | 96.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4059207 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.71 | 52.0 | 5.12e-01 | 80.8% | 71.2% |
| 4217250 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.70 | 51.0 | 4.13e-01 | 79.8% | 41.1% |
| 9400 | 2003.1.5.32 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 | 0.70 | 53.0 | 5.58e-01 | 80.8% | 85.2% |
| 4264617 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.70 | 53.0 | 4.22e-01 | 80.3% | 41.9% |
| 4052441 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.69 | 53.0 | 4.18e-01 | 81.8% | 40.8% |
| 4327911 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.69 | 52.0 | 4.11e-01 | 81.3% | 40.5% |
| 4191615 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.69 | 51.0 | 5.00e-01 | 80.3% | 71.0% |
| None | — | 0.69 | 52.0 | 4.25e-01 | 81.3% | 44.3% | |
| None | — | 0.69 | 52.0 | 4.18e-01 | 81.3% | 42.8% | |
| None | — | 0.69 | 54.0 | 4.25e-01 | 80.8% | 42.4% | |
| 4288046 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.69 | 50.0 | 5.09e-01 | 80.8% | 74.9% |
| 4318793 | 2003.1.5.196 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr | 0.69 | 54.0 | 4.22e-01 | 82.3% | 40.5% |
| 4185320 | 2003.1.5.174 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 | 0.68 | 54.0 | 4.30e-01 | 82.3% | 43.2% |
| 4021707 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.68 | 54.0 | 4.89e-01 | 81.3% | 80.4% |
| 4450869 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.68 | 54.0 | 4.21e-01 | 82.8% | 41.8% |
| 3954323 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.68 | 53.0 | 4.35e-01 | 81.8% | 47.5% |
| 4552580 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.68 | 53.0 | 4.18e-01 | 81.3% | 41.6% |
| 4206372 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.68 | 53.0 | 4.13e-01 | 82.3% | 40.8% |
| 4371842 | 2003.1.5.156 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 | 0.67 | 53.0 | 4.16e-01 | 82.3% | 41.0% |
| 4947982 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.67 | 57.0 | 4.92e-01 | 87.9% | 72.1% |
| 4328605 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.67 | 55.0 | 5.03e-01 | 92.9% | 67.2% |
| 4186244 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.67 | 54.0 | 5.08e-01 | 92.4% | 70.6% |
| 3739334 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.66 | 52.0 | 4.51e-01 | 80.8% | 56.0% |
| 3587737 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.66 | 52.0 | 4.83e-01 | 82.3% | 88.6% |
| 4029444 | 2003.1.5.196 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr | 0.65 | 57.0 | 4.35e-01 | 91.9% | 44.8% |
| 3615134 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.64 | 55.0 | 4.79e-01 | 90.4% | 76.0% |
| 3281961 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.63 | 48.0 | 4.38e-01 | 80.8% | 61.2% |
| 3332978 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 45.0 | 4.15e-01 | 85.4% | 61.2% |
| 4614542 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 34.0 | 4.35e-01 | 76.8% | 100.0% |
| 3715211 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.56 | 36.0 | 4.19e-01 | 77.3% | 89.7% |
| 3595022 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.55 | 35.0 | 4.06e-01 | 77.3% | 89.3% |
D2
medium
residues 180-261_300-333_406-449
D3
medium
residues 334-405