nsP2

Euk-Vir

Highlands_J_virus

nsP2__YP_002802302__Highlands_J_virus__11024

Identity

76.7 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Togaviridae› Alphavirus› Highlands_J_virus

TaxID: 11024

View cluster (15 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 172-310

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	65.6	8.60e-18	92.8%	49.6%
PF13604.13	AAA_30	29.8	6.80e-07	77.0%	55.5%

D2 high residues 476-591

PDB

Domain cluster: rep: nsP2_protein__NP_740650__Eastern_equine_encephalitis_virus__11021__D477-591

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01707.23 best	Peptidase_C9	148.2	3.50e-43	100.0%	57.4%

D3 high residues 622-785

PDB

Domain cluster: rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632

D4 medium residues 1-79

PDB

D5 medium residues 80-141

PDB

D6 medium residues 313-333_429-468

PDB

Domain cluster: rep: nsP2_protein__YP_913812__Eastern_equine_encephalitis_virus__11021__D312-334_436-464

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01707.23 best	Peptidase_C9	34.5	2.20e-08	67.2%	16.8%

D7 medium residues 334-428

PDB

Domain cluster: rep: TGB1_protein__NP_619560__Garlic_latent_virus__12458__D129-228