nsp12

Euk-Vir

Human_coronavirus_HKU1

nsp12__YP_459941__Human_coronavirus_HKU1__290028

Identity

88.6 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Nidovirales› Coronaviridae› Betacoronavirus› Human_coronavirus_HKU1

TaxID: 290028

View cluster (23 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 811-920

PDB

Domain cluster: rep: NSP12__YP_009825029__Duck_coronavirus__300188__D836-945

D2 medium residues 1-121

PDB

Domain cluster: rep: nsp12__YP_008439222__Bat_coronavirus_CDPHE15_USA_2006__1384461__D18-119

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06478.20 best	CoV_RPol_N	119.2	2.90e-34	89.3%	29.7%

D3 medium residues 322-386

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__NP_740629__Infectious_bronchitis_virus__11120__D333-394

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06478.20 best	CoV_RPol_N	56.0	4.80e-15	63.1%	11.7%

D4 medium residues 434-453_477-599_636-666

PDB

Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224

D5 medium residues 454-476_600-635_667-807

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__NP_740629__Infectious_bronchitis_virus__11120__D588-652_702-839