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nsp14
Euk-VirHuman_coronavirus_HKU1
nsp14__YP_460021__Human_coronavirus_HKU1__290028
Identity
- Accession:
- YP_460021 ↗
- Protein ID:
- nsp14
- Kingdom:
- euk
Quality
86.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_HKU1
TaxID: 290028
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62_121-136
D2
medium
residues 63-86_158-248
Domain cluster:
rep: ExoN__YP_009047225__Middle_East_respiratory_syndrome-related_coronavirus__1335626__D75-90_159-290
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06471.20 best | CoV_ExoN | 126.9 | 1.30e-36 | 80.0% | 17.5% |
D3
medium
residues 87-120_137-157_249-286
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06471.20 best | CoV_ExoN | 61.5 | 9.00e-17 | 60.2% | 13.6% |
| PF06471.20 | CoV_ExoN | 57.0 | 2.00e-15 | 43.0% | 7.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 60.0 | 4.95e-01 | 100.0% | 97.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4882792 | 2003.1.5.57 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CoV_ExoN | 0.96 | 93.0 | 6.27e-01 | 100.0% | 69.9% |
| 4863759 | 2484.1.1.52 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CoV_ExoN | 0.65 | 62.0 | 4.65e-01 | 100.0% | 77.4% |
D4
medium
residues 287-435
Domain cluster:
rep: coronavirus_nsp11__NP_740631__Infectious_bronchitis_virus__11120__D299-519
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06471.20 best | CoV_ExoN | 212.9 | 1.20e-62 | 100.0% | 29.1% |
D5
medium
residues 436-521
Domain cluster:
rep: 3_to_5_exonuclease__YP_009555255__Human_coronavirus_OC43__31631__D438-498
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06471.20 best | CoV_ExoN | 112.8 | 2.60e-32 | 97.7% | 15.3% |