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nsp1ab

Euk-Vir

Bovine_astrovirus_B18_HK

nsp1ab__YP_009010949__Bovine_astrovirus_B18_HK__1027245

Identity

Accession:
YP_009010949 ↗
Protein ID:
nsp1ab
Kingdom:
euk

Quality

71.5 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Mamastrovirus› Bovine_astrovirus_B18/HK

TaxID: 1027245

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-91
PDB
D2 high residues 726-795
PDB
Domain cluster: rep: NSP1a__YP_009041463__Bovine_astrovirus__1435485__D684-783
D3 high residues 1228-1296
PDB
Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D442-513
D4 medium residues 238-365
PDB
D5 medium residues 406-485
PDB
Domain cluster: rep: ORF1a__YP_009162618__Dromedary_astrovirus__1662272__D428-481
D6 medium residues 486-567
PDB
Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
D7 medium residues 870-891_924-1025_1095-1107
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 34.2 1.80e-08 92.0% 25.1%
D8 medium residues 1026-1094_1108-1223
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009333212__Beihai_astro-like_virus__1922353__D104-144_202-314
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 103.0 2.30e-29 99.5% 42.0%