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nsp2
Euk-VirHuman_coronavirus_HKU1
nsp2__YP_459934__Human_coronavirus_HKU1__290028
Identity
- Accession:
- YP_459934 ↗
- Protein ID:
- nsp2
- Kingdom:
- euk
Quality
70.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_HKU1
TaxID: 290028
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-91
Domain cluster:
rep: nsp2__YP_009924384__Rousettus_bat_coronavirus_HKU9__694006__D2-83
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11963.14 best | B-CoV_A_NSP1 | 155.9 | 2.50e-45 | 100.0% | 24.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e84B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 3.00e-01 | 97.7% | 84.5% |
D2
high
residues 105-279
Domain cluster:
rep: nsp2__YP_009915689__Murine_hepatitis_virus__11138__D110-226_244-292
D3
high
residues 509-577
D4
medium
residues 300-369
D5
medium
residues 370-508
Domain cluster:
rep: nsp2__YP_009944270__Human_coronavirus_HKU1__290028__D345-475