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nsp4_-TM2-
Euk-VirHuman_coronavirus_HKU1
nsp4_-TM2-__YP_459935__Human_coronavirus_HKU1__290028
Identity
- Accession:
- YP_459935 ↗
- Protein ID:
- nsp4_-TM2-
- Kingdom:
- euk
Quality
79.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_HKU1
TaxID: 290028
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 276-397
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D276-394
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 82.5 | 5.90e-23 | 84.4% | 28.7% |
D2
high
residues 409-483
Domain cluster:
rep: nsp4_-TM2-__YP_009944272__Human_coronavirus_HKU1__290028__D409-483
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16348.11 best | CoV_NSP4_C | 106.8 | 1.20e-30 | 100.0% | 77.1% |
D3
medium
residues 42-121
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D42-118
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 77.9 | 1.40e-21 | 100.0% | 21.3% |
D4
medium
residues 181-271
Domain cluster:
rep: NSP4__YP_001941177__Turkey_coronavirus__11152__D222-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 103.2 | 3.00e-29 | 100.0% | 25.3% |