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nsp4
Euk-VirRat_coronavirus_Parker
nsp4__YP_009924360__Rat_coronavirus_Parker__502102
Identity
- Accession:
- YP_009924360 ↗
- Protein ID:
- nsp4
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Rat_coronavirus_Parker
TaxID: 502102
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-122
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D42-118
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 83.4 | 3.10e-23 | 100.0% | 21.6% |
D2
high
residues 276-396
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D276-394
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 80.2 | 2.90e-22 | 85.1% | 28.7% |
D3
high
residues 409-483
Domain cluster:
rep: nsp4_-TM2-__YP_009944272__Human_coronavirus_HKU1__290028__D409-483
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16348.11 best | CoV_NSP4_C | 113.9 | 7.10e-33 | 100.0% | 77.1% |
D4
medium
residues 130-270
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 160.4 | 1.20e-46 | 100.0% | 38.6% |