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nsp4
Euk-VirRabbit_coronavirus_HKU14
nsp4__YP_009944257__Rabbit_coronavirus_HKU14__1160968
Identity
- Accession:
- YP_009944257 ↗
- Protein ID:
- nsp4
- Kingdom:
- euk
Quality
78.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Rabbit_coronavirus_HKU14
TaxID: 1160968
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-124
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D42-118
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 76.8 | 3.20e-21 | 100.0% | 22.2% |
D2
high
residues 130-269
Domain cluster:
rep: nsp4__YP_009924360__Rat_coronavirus_Parker__502102__D130-270
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 167.2 | 1.00e-48 | 100.0% | 38.9% |
D3
high
residues 276-400
Domain cluster:
rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D276-394
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19217.6 best | CoV_NSP4_N | 83.5 | 2.90e-23 | 82.4% | 28.4% |
D4
high
residues 409-483
Domain cluster:
rep: nsp4_-TM2-__YP_009944272__Human_coronavirus_HKU1__290028__D409-483
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16348.11 best | CoV_NSP4_C | 108.3 | 4.00e-31 | 100.0% | 77.1% |