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nsp5
Euk-VirCanada_goose_coronavirus
nsp5__YP_009755914__Canada_goose_coronavirus__2569586
Identity
- Accession:
- YP_009755914 ↗
- Protein ID:
- nsp5
- Kingdom:
- euk
Quality
92.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Gammacoronavirus›
Canada_goose_coronavirus
TaxID: 2569586
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 199-302
Domain cluster:
rep: 3C-like_cysteine_proteinase__YP_009944285__Betacoronavirus_England_1__1263720__D204-301
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 98.5 | 6.30e-28 | 100.0% | 33.8% |
D2
medium
residues 1-12_98-189
Domain cluster:
rep: 3C-like_protease__NP_828863__SARS_coronavirus_Tor2__227984__D1-14_99-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 139.4 | 2.10e-40 | 96.2% | 33.1% |
D3
medium
residues 13-97
Domain cluster:
rep: NSP5__YP_001941178__Turkey_coronavirus__11152__D14-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05409.21 best | Peptidase_C30 | 75.2 | 8.00e-21 | 81.2% | 24.6% |