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nuclear_egress_lamina_protein
Euk-VirBovine_alphaherpesvirus_1
nuclear_egress_lamina_protein__NP_045327__Bovine_alphaherpesvirus_1__10320
Identity
- Accession:
- NP_045327 ↗
- Protein ID:
- nuclear_egress_lamina_protein
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
bovine_alphaherpesvirus_1
TaxID: 10320
Cluster
View cluster (45 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 158-206_218-356
Domain cluster:
rep: nuclear_egress_lamina_protein__YP_009176906__Testudinid_alphaherpesvirus_3__2560801__D127-287
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02718.21 best | Herpes_UL31 | 177.4 | 3.80e-52 | 98.9% | 75.2% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.57 | 24.0 | 3.76e-01 | 71.3% | 100.0% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 31.0 | 3.78e-01 | 88.3% | 83.6% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 31.0 | 3.76e-01 | 80.3% | 84.2% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 28.0 | 3.58e-01 | 86.7% | 83.8% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 38.0 | 3.42e-01 | 77.1% | 91.3% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 32.0 | 3.77e-01 | 80.9% | 92.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2813817 | 225.3.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Virion egress protein UL31 homolog › Virion egress protein UL31 homolog › Herpes_UL31 | 0.97 | 85.0 | 7.70e-01 | 100.0% | 71.2% |
| 1693530 | 225.3.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Virion egress protein UL31 homolog › Virion egress protein UL31 homolog › Herpes_UL31 | 0.89 | 73.0 | 6.87e-01 | 100.0% | 71.6% |
| 5011633 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.66 | 36.0 | 4.78e-01 | 71.8% | 96.2% |
| 4997777 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 29.0 | 4.14e-01 | 84.6% | 100.0% |
| 3603763 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 28.0 | 3.94e-01 | 86.2% | 92.2% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.56 | 29.0 | 3.95e-01 | 83.5% | 100.0% |
| 3602137 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 28.0 | 3.77e-01 | 86.7% | 94.7% |
| 4429744 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 25.0 | 3.45e-01 | 80.9% | 84.2% |
| 5029252 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 30.0 | 3.70e-01 | 84.6% | 83.3% |
| 1159602 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 28.0 | 3.57e-01 | 88.8% | 83.0% |
| 4450775 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.54 | 27.0 | 3.50e-01 | 83.5% | 83.7% |
| 3480732 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 30.0 | 3.75e-01 | 71.3% | 90.0% |
| 3178011 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.54 | 30.0 | 3.43e-01 | 79.8% | 71.4% |
| 4616161 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.52 | 25.0 | 3.24e-01 | 79.8% | 79.0% |
| 3454258 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.52 | 24.0 | 3.60e-01 | 77.1% | 97.6% |
| 3804630 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 32.0 | 3.75e-01 | 86.2% | 89.6% |
| 5052596 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 29.0 | 3.66e-01 | 80.9% | 98.0% |
| 4298844 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 25.0 | 3.35e-01 | 86.2% | 89.5% |
| 4234924 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.51 | 25.0 | 3.32e-01 | 84.6% | 87.0% |