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nuclear_egress_lamina_protein
Euk-VirCercopithecine_betaherpesvirus_5
nuclear_egress_lamina_protein__YP_004936029__Cercopithecine_betaherpesvirus_5__50292
Identity
- Accession:
- YP_004936029 ↗
- Protein ID:
- nuclear_egress_lamina_protein
- Kingdom:
- euk
Quality
82.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cercopithecine_betaherpesvirus_5
TaxID: 50292
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-278
Domain cluster:
rep: nuclear_egress_lamina_protein__YP_009176906__Testudinid_alphaherpesvirus_3__2560801__D127-287
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02718.21 best | Herpes_UL31 | 153.3 | 8.40e-45 | 95.6% | 68.1% |
D2
medium
residues 51-117
Domain cluster:
rep: docking_protein__YP_009179300__Elephant_endotheliotropic_herpesvirus_4__548914__D53-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02718.21 best | Herpes_UL31 | 84.9 | 7.20e-24 | 100.0% | 29.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i7qA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.52 | 37.0 | 2.25e-01 | 77.6% | 39.1% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 35.0 | 3.13e-01 | 70.1% | 73.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2813817 | 225.3.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Virion egress protein UL31 homolog › Virion egress protein UL31 homolog › Herpes_UL31 | 0.70 | 59.0 | 3.96e-01 | 89.6% | 62.7% |
| 3344993 | 109.4.1.2176 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.55 | 43.0 | 2.44e-01 | 89.6% | 14.0% |
| 4973181 | 2003.1.5.33 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0146 | 0.55 | 39.0 | 3.20e-01 | 76.1% | 51.5% |
| 3670241 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 2.78e-01 | 89.6% | 36.0% |
| 3325236 | 109.4.1.2327 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_6, HEAT_GCN1, TPR_IMB1, TPR_IPO5 | 0.53 | 41.0 | 2.28e-01 | 89.6% | 11.3% |
| 3510258 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 35.0 | 3.52e-01 | 70.1% | 85.7% |
| 4167932 | 101.1.2.177 ↗ | alpha arrays › HTH › HTH › winged helix domain › MARF1_LOTUS | 0.52 | 36.0 | 3.38e-01 | 73.1% | 85.9% |
| 3391690 | 11.1.1.860 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CLSTN_C | 0.52 | 36.0 | 2.93e-01 | 74.6% | 65.0% |
| 3882431 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.52 | 39.0 | 2.86e-01 | 82.1% | 59.8% |
| 3394098 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.50 | 37.0 | 2.43e-01 | 85.1% | 22.9% |