←Back to structures
nuclear_egress_membrane_protein
Euk-VirCercopithecine_alphaherpesvirus_9
nuclear_egress_membrane_protein__NP_077439__Cercopithecine_alphaherpesvirus_9__35246
Identity
- Accession:
- NP_077439 ↗
- Protein ID:
- nuclear_egress_membrane_protein
- Kingdom:
- euk
Quality
65.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Cercopithecine_alphaherpesvirus_9
TaxID: 35246
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-116
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04541.20 best | Herpes_U34 | 139.2 | 1.20e-40 | 99.1% | 60.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8xB00 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.56 | 31.0 | 3.44e-01 | 86.5% | 66.3% |
| 4mzuF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 38.0 | 3.47e-01 | 89.2% | 54.7% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.54 | 28.0 | 3.44e-01 | 88.3% | 81.8% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.25e-01 | 92.8% | 64.7% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.51 | 46.0 | 3.40e-01 | 100.0% | 90.2% |
| 1ks6A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 39.0 | 4.02e-01 | 95.5% | 85.0% |
| 5jpnB04 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.52e-01 | 92.8% | 66.1% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 39.0 | 3.91e-01 | 93.7% | 82.1% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 31.0 | 3.34e-01 | 79.3% | 74.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2813818 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.98 | 95.0 | 7.80e-01 | 100.0% | 62.0% |
| 4802986 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.85 | 76.0 | 6.30e-01 | 100.0% | 57.5% |
| 4802990 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.84 | 79.0 | 6.51e-01 | 100.0% | 61.2% |
| 3363778 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.66 | 34.0 | 4.57e-01 | 74.8% | 98.2% |