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nuclear_inclusion_b_protein
Euk-VirHabenaria_mosaic_virus
nuclear_inclusion_b_protein__YP_008320590__Habenaria_mosaic_virus__1324128
Identity
- Accession:
- YP_008320590 ↗
- Protein ID:
- nuclear_inclusion_b_protein
- Kingdom:
- euk
Quality
91.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Habenaria_mosaic_virus
TaxID: 1324128
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-33_64-216_276-310
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 68.8 | 5.40e-19 | 81.7% | 35.3% |
D2
medium
residues 34-63_398-489
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D3
medium
residues 217-275_311-397
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 48.7 | 7.00e-13 | 61.0% | 21.1% |
| PF00680.26 | RdRP_1 | 37.2 | 2.10e-09 | 40.4% | 11.8% |