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nuclear_inclusion_protein_B
Euk-VirChilli_veinal_mottle_virus
nuclear_inclusion_protein_B__NP_982343__Chilli_veinal_mottle_virus__52280
Identity
- Accession:
- NP_982343 ↗
- Protein ID:
- nuclear_inclusion_protein_B
- Kingdom:
- euk
Quality
77.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Chilli_veinal_mottle_virus
TaxID: 52280
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-80_119-193
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 47.2 | 2.00e-12 | 98.0% | 18.7% |
D2
medium
residues 81-118_194-216_252-313
Domain cluster:
rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 42.4 | 5.50e-11 | 52.0% | 13.3% |
D3
medium
residues 217-251_314-408
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 36.4 | 3.60e-09 | 74.6% | 22.4% |
D4
medium
residues 409-476
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481