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nuclear_matrix_associated_phosphoprotein

Euk-Vir

Condylorrhiza_vestigialis_MNPV

nuclear_matrix_associated_phosphoprotein__YP_009118600__Condylorrhiza_vestigialis_MNPV__1592576

Identity

Accession:
YP_009118600 ↗
Protein ID:
nuclear_matrix_associated_phosphoprotein
Kingdom:
euk

Quality

70.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus

TaxID: 1592576

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 76-132_151-210
PDB
Domain cluster: rep: PP31__YP_009505838__Spodoptera_littoralis_nucleopolyhedrovirus__10456__D93-143_173-243
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05311.18 best Baculo_PP31 152.0 3.20e-44 100.0% 51.7%
D2 medium residues 14-67
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05311.18 best Baculo_PP31 52.7 6.40e-14 88.9% 18.1%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5u89A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.58 43.0 3.11e-01 81.5% 70.5%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 42.0 3.24e-01 81.5% 85.3%
4qclA03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 39.0 2.48e-01 77.8% 47.2%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 43.0 3.49e-01 88.9% 90.5%
4xcvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 3.10e-01 98.1% 94.7%
3pp8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 3.04e-01 94.4% 82.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3530812 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.58 39.0 3.36e-01 72.2% 44.2%
3789186 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.58 41.0 2.71e-01 81.5% 69.7%
3687305 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.57 48.0 2.90e-01 100.0% 82.5%
3272128 109.6.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N 0.52 38.0 2.84e-01 81.5% 86.0%
4809675 148.1.3.7 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DAP3 0.50 36.0 2.51e-01 85.2% 76.8%