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nuclear_protein_UL24
Euk-VirPanine_betaherpesvirus_2
nuclear_protein_UL24__NP_612709__Panine_betaherpesvirus_2__188763
Identity
- Accession:
- NP_612709 ↗
- Protein ID:
- nuclear_protein_UL24
- Kingdom:
- euk
Quality
68.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Panine_betaherpesvirus_2
TaxID: 188763
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-220
Domain cluster:
rep: E76__YP_007016474__Murid_betaherpesvirus_8__1261657__D6-192
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01646.24 best | Herpes_UL24 | 168.1 | 2.40e-49 | 95.1% | 98.9% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.75 | 33.0 | 4.19e-01 | 74.9% | 67.7% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 37.0 | 5.11e-01 | 76.4% | 100.0% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 42.0 | 4.26e-01 | 84.2% | 67.1% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.60 | 46.0 | 3.86e-01 | 78.8% | 53.9% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.60 | 46.0 | 3.80e-01 | 78.8% | 52.6% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 40.0 | 4.10e-01 | 84.2% | 74.2% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.57 | 43.0 | 3.73e-01 | 79.3% | 61.6% |
| 1dmuA00 | 3.40.600.20 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI | 0.55 | 45.0 | 3.91e-01 | 84.2% | 58.2% |
| 4i43B04 | 3.90.1570.40 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › Pre-mRNA-processing-splicing factor 8 (Prp8), endonuclease domain | 0.55 | 37.0 | 4.05e-01 | 76.8% | 80.2% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.53 | 40.0 | 3.02e-01 | 77.8% | 90.9% |
| 1otgA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.52 | 31.0 | 3.89e-01 | 88.2% | 96.8% |
| 3cniA00 | 3.40.1710.10 | Alpha Beta › 3-Layer(aba) Sandwich › abc type-2 transporter like fold › abc type-2 transporter like domain | 0.51 | 34.0 | 3.96e-01 | 81.3% | 93.1% |
| 4pswA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 27.0 | 3.27e-01 | 72.9% | 76.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4660505 | 2008.1.1.186 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_9 | 0.82 | 43.0 | 5.05e-01 | 78.8% | 71.0% |
| 4141864 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.71 | 42.0 | 5.42e-01 | 78.8% | 100.0% |
| 5053736 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 39.0 | 4.20e-01 | 76.8% | 63.4% |
| 4620724 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.67 | 40.0 | 4.99e-01 | 79.3% | 98.3% |
| 4534629 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.66 | 40.0 | 4.99e-01 | 77.3% | 99.2% |
| 4945329 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.64 | 40.0 | 3.92e-01 | 78.3% | 57.7% |
| 3751785 | 3535.1.1.2 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › SLFN_GTPase-like | 0.63 | 45.0 | 5.15e-01 | 85.7% | 96.8% |
| 4967863 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 39.0 | 4.86e-01 | 77.3% | 100.0% |
| 5070502 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 41.0 | 4.76e-01 | 91.1% | 93.8% |
| 4336254 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.60 | 49.0 | 3.81e-01 | 84.7% | 78.6% |
| 4501322 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 48.0 | 4.61e-01 | 84.2% | 90.9% |
| None | — | 0.59 | 48.0 | 4.14e-01 | 84.7% | 68.9% | |
| 5044476 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 28.0 | 3.70e-01 | 73.4% | 81.8% |
| 4036845 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.59 | 48.0 | 4.23e-01 | 84.7% | 65.3% |
| 3457392 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.59 | 48.0 | 4.19e-01 | 84.2% | 74.7% |
| 5077023 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.58 | 45.0 | 4.93e-01 | 78.8% | 98.2% |
| 4986981 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.58 | 47.0 | 4.55e-01 | 85.2% | 76.4% |
| 3815585 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.57 | 40.0 | 3.64e-01 | 76.8% | 52.6% |
| 3555330 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.57 | 46.0 | 4.10e-01 | 84.2% | 77.5% |
| 3194723 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.57 | 47.0 | 3.86e-01 | 84.2% | 74.0% |
| 4168626 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.57 | 46.0 | 4.23e-01 | 84.7% | 82.3% |
| 4958249 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.57 | 46.0 | 4.25e-01 | 84.2% | 73.3% |
| 2570431 | 2008.1.1.75 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › capSnatchArena | 0.57 | 40.0 | 4.12e-01 | 79.3% | 73.6% |
| 4022097 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.56 | 46.0 | 4.08e-01 | 84.2% | 70.5% |
| 3806936 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.55 | 39.0 | 3.32e-01 | 78.3% | 42.3% |
| 5056125 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.55 | 36.0 | 4.31e-01 | 85.2% | 100.0% |
| 3514202 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.55 | 41.0 | 4.01e-01 | 75.9% | 76.3% |
| 3343783 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.55 | 38.0 | 3.37e-01 | 76.8% | 46.9% |
| None | — | 0.54 | 39.0 | 4.01e-01 | 79.8% | 76.4% | |
| 4171461 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 39.0 | 4.09e-01 | 74.4% | 94.1% |
| 4965212 | 2008.1.1.233 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26226 | 0.53 | 39.0 | 4.31e-01 | 76.4% | 95.0% |
| 5005553 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.52 | 42.0 | 3.84e-01 | 84.7% | 78.1% |
| 3467281 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 38.0 | 3.64e-01 | 76.8% | 65.7% |
| 4023992 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.51 | 39.0 | 3.11e-01 | 77.3% | 68.1% |
| 3730987 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 36.0 | 3.85e-01 | 78.3% | 82.3% |
| 3612268 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 45.0 | 4.41e-01 | 94.6% | 100.0% |
| 3258438 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.51 | 32.0 | 3.70e-01 | 84.2% | 87.6% |