nucleocapsid,_partial

Euk-Vir

Seattle_Prectang_virus

nucleocapsid,_partial__YP_009666960__Seattle_Prectang_virus__1892235

Identity

71.1 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Phasmaviridae› Orthophasmavirus› Seattle_Prectang_virus

TaxID: 1892235

View cluster (16 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 187-293

PDB

Domain cluster: rep: nucleocapsid__YP_009664552__Ferak_virus__1664810__D164-285

D2 medium residues 63-186

PDB

Domain cluster: rep: nucleocapsid_protein__YP_009553312__Yongsan_bunyavirus_1__2315803__D65-226

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ib5A00	3.10.570.10	Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain	0.52	41.0	3.02e-01	83.9%	96.5%
6lpwA02	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.50	36.0	3.11e-01	75.8%	89.2%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5081200	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.60	23.0	3.30e-01	89.5%	73.3%
3939327	5001.1.1.5 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3	0.55	41.0	3.10e-01	80.6%	72.6%
3231100	859.1.1.0 ↗	a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2	0.51	38.0	3.23e-01	79.0%	84.5%
3264554	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.50	39.0	2.88e-01	96.0%	29.0%