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nucleocapsid_-N-_protein
Euk-VirVesicular_stomatitis_Indiana_virus
nucleocapsid_-N-_protein__NP_041712__Vesicular_stomatitis_Indiana_virus__11277
Identity
- Accession:
- NP_041712 ↗
- Protein ID:
- nucleocapsid_-N-_protein
- Kingdom:
- euk
Quality
88.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Vesiculovirus›
Vesicular_stomatitis_Indiana_virus
TaxID: 11277
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-220
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 313.2 | 3.70e-93 | 100.0% | 44.9% |
D2
high
residues 226-343_365-421
Domain cluster:
rep: nucleocapsid_protein__YP_009551688__Merida-like_virus_KE-2017a__1969830__D268-379
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 198.7 | 2.20e-58 | 70.3% | 29.3% |
| PF00945.24 | Rhabdo_ncap | 38.8 | 8.00e-10 | 24.6% | 10.2% |