←Back to structures
nucleocapsid
Euk-VirFikirini_rhabdovirus
nucleocapsid__YP_009094018__Fikirini_rhabdovirus__1408144
Identity
- Accession:
- YP_009094018 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
90.7
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Ledantevirus›
Fikirini_virus
TaxID: 1408144
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-227
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 89.3 | 3.70e-25 | 100.0% | 44.1% |
D2
high
residues 245-351_372-426
Domain cluster:
rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 97.8 | 9.80e-28 | 67.3% | 25.6% |