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nucleocapsid
Euk-VirShayang_Fly_Virus_2
nucleocapsid__YP_009300664__Shayang_Fly_Virus_2__1608066
Identity
- Accession:
- YP_009300664 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
85.2
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sigmavirus›
Shayang_Fly_Virus_2
TaxID: 1608066
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-228
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 101.0 | 1.10e-28 | 100.0% | 44.1% |
D2
high
residues 233-434
Domain cluster:
rep: nucleoprotein__YP_009094365__Almpiwar_virus__318843__D225-426
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 117.9 | 7.80e-34 | 93.1% | 45.1% |