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nucleocapsid
Euk-VirWuhan_Insect_virus_4
nucleocapsid__YP_009300684__Wuhan_Insect_virus_4__1608109
Identity
- Accession:
- YP_009300684 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
72.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Alphacytorhabdovirus›
Wuhan_Insect_virus_4
TaxID: 1608109
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 91-171_234-339
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 48.8 | 9.00e-13 | 100.0% | 67.3% |
D2
high
residues 345-484
Domain cluster:
rep: nucleocapsid__YP_009289348__Sanxia_Water_Strider_Virus_5__1608064__D276-411
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 72.0 | 7.60e-20 | 60.0% | 28.9% |
D3
medium
residues 172-221