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nucleocapsid
Euk-VirWuhan_Insect_virus_5
nucleocapsid__YP_009300870__Wuhan_Insect_virus_5__1608110
Identity
- Accession:
- YP_009300870 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
71.2
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Alphacytorhabdovirus›
Wuhan_Insect_virus_5
TaxID: 1608110
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-141_200-307
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 40.2 | 4.00e-10 | 98.9% | 63.2% |
D2
high
residues 313-444
Domain cluster:
rep: nucleocapsid_protein__YP_010087150__Cytorhabdovirus_caricae__2364291__D277-416_434-447
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 63.6 | 2.70e-17 | 64.4% | 29.5% |