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nucleocapsid
Euk-VirWuhan_Insect_virus_7
nucleocapsid__YP_009301739__Wuhan_Insect_virus_7__1608112
Identity
- Accession:
- YP_009301739 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
85.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Wuhan_Insect_virus_7
TaxID: 1608112
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-223
Domain cluster:
rep: nucleocapsid_protein__YP_008686596__Drosophila_obscura_sigmavirus_10A__666962__D36-146_214-247
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 76.9 | 2.10e-21 | 100.0% | 44.6% |
D2
medium
residues 225-348
Domain cluster:
rep: nucleocapsid__YP_009302014__Wuhan_Louse_Fly_Virus_10__1608114__D226-319_345-374
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00945.24 best | Rhabdo_ncap | 88.8 | 5.00e-25 | 100.0% | 29.3% |
D3
medium
residues 372-425
Domain cluster:
rep: nucleoprotein__YP_009362111__Marco_virus__1158190__D382-436
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gicD02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.90 | 83.0 | 5.49e-01 | 100.0% | 27.7% |