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nucleocapsid
Euk-VirRockport_virus
nucleocapsid__YP_009507828__Rockport_virus__1001080
Identity
- Accession:
- YP_009507828 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
82.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Elliovirales›
Hantaviridae›
Orthohantavirus›
Rockport_virus
TaxID: 1001080
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 119-180
Domain cluster:
rep: nucleocapsid__YP_010088057__Tatenale_orthohantavirus__2651812__D119-181
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 83.3 | 2.40e-23 | 100.0% | 14.5% |
D2
medium
residues 1-73
Domain cluster:
rep: nucleocapsid_protein__YP_009362056__Cao_Bang_orthohantavirus__1980464__D1-71
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 34.4 | 1.70e-08 | 100.0% | 16.9% |
D3
medium
residues 198-322
Domain cluster:
rep: nucleocapsid_protein__YP_009361844__Jeju_virus__990280__D216-309
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 134.0 | 9.80e-39 | 100.0% | 28.8% |
D4
medium
residues 323-428
Domain cluster:
rep: nucleocapsid_protein__YP_001911121__Thottopalayam_virus__1980493__D301-430
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00846.25 best | Hanta_nucleocap | 198.4 | 2.70e-58 | 100.0% | 24.8% |