nucleocapsid

Euk-Vir

Cumuto_virus

nucleocapsid__YP_009664617__Cumuto_virus__1457166

Identity

77.7 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Phenuiviridae› Goukovirus› Cumuto_virus

TaxID: 1457166

View cluster (83 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-137

PDB

Domain cluster: rep: putative_nucleoprotein__YP_009330282__Hubei_diptera_virus_5__1922886__D214-314

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05733.17 best	Tenui_N	39.3	7.80e-10	95.4%	49.1%

D2 high residues 148-265

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fm3A00	1.20.1270.390	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.54	33.0	3.70e-01	78.0%	76.8%
2bk9A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	36.0	3.35e-01	70.3%	84.3%
6o0aA01	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.52	36.0	3.34e-01	70.3%	79.9%
3ihuA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.50	41.0	3.84e-01	98.3%	71.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5065054	603.1.1.238 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Cpn60_TCP1	0.57	35.0	3.92e-01	78.8%	77.9%
3632454	650.1.1.0 ↗	alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain	0.56	38.0	4.39e-01	74.6%	95.3%
4997587	3651.1.1.1 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B	0.52	43.0	4.12e-01	87.3%	87.4%