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nucleocapsid
Euk-VirAlston_virus
nucleocapsid__YP_010087167__Alston_virus__2495433
Identity
- Accession:
- YP_010087167 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Orthorubulavirus›
Alston_virus
TaxID: 2495433
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 266-373
Domain cluster:
rep: nucleocapsid_protein__NP_054707__Mumps_orthorubulavirus__2560602__D281-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 168.5 | 3.30e-49 | 100.0% | 27.0% |
D2
medium
residues 31-142
Domain cluster:
rep: nucleocapsid_protein__YP_009177597__Phocine_morbillivirus__11240__D32-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 71.0 | 1.30e-19 | 100.0% | 26.8% |
D3
medium
residues 143-243
Domain cluster:
rep: nucleocapsid_protein__YP_009094451__Achimota_virus_1__1261100__D146-225
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00973.26 best | Paramyxo_ncap | 99.8 | 2.30e-28 | 100.0% | 24.5% |