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nucleocapsid
Euk-VirRaspberry_vein_chlorosis_virus
nucleocapsid__YP_010087288__Raspberry_vein_chlorosis_virus__758677
Identity
- Accession:
- YP_010087288 ↗
- Protein ID:
- nucleocapsid
- Kingdom:
- euk
Quality
72.2
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Alphacytorhabdovirus›
Raspberry_vein_chlorosis_virus
TaxID: 758677
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 345-486
Domain cluster:
rep: nucleocapsid_protein__YP_010087150__Cytorhabdovirus_caricae__2364291__D277-416_434-447
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 61.8 | 1.00e-16 | 62.0% | 29.5% |
D2
medium
residues 90-163_239-344
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 43.1 | 5.10e-11 | 87.8% | 34.7% |