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nucleocapsid_phosphoprotein
Euk-VirHuman_coronavirus_HKU1
nucleocapsid_phosphoprotein__YP_173242__Human_coronavirus_HKU1__290028
Identity
- Accession:
- YP_173242 ↗
- Protein ID:
- nucleocapsid_phosphoprotein
- Kingdom:
- euk
Quality
62.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Human_coronavirus_HKU1
TaxID: 290028
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-192
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 140.1 | 1.40e-40 | 100.0% | 36.3% |
D2
medium
residues 252-316_352-375
Domain cluster:
rep: nucleocapsid_protein__NP_045302__Murine_hepatitis_virus__11138__D254-319_356-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 73.7 | 2.20e-20 | 83.2% | 18.6% |