nucleocapsid_protein,_partial

Euk-Vir

Artashat_orthonairovirus

nucleocapsid_protein,_partial__YP_009666120__Artashat_orthonairovirus__2170061

Identity

79.2 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Nairoviridae› Orthonairovirus› Orthonairovirus_artashatense

TaxID: 2170061

View cluster (24 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 194-293

PDB

Domain cluster: rep: nucleoprotein__YP_009553334__Tunis_virus__1810944__D200-304

D2 medium residues 45-70_159-184_302-386_415-443

PDB

Domain cluster: rep: nucleocapsid_protein__YP_009304991__Wenzhou_Tick_Virus__1608094__D163-190_310-440

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02477.21 best	Nairo_nucleo	88.7	5.60e-25	56.0%	19.4%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1mhyG02	1.20.1280.30	Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2	0.67	23.0	3.49e-01	100.0%	71.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1723600	3574.1.1.1 ↗	alpha complex topology › Nucleocapsid protein › Nucleocapsid protein › Nucleocapsid protein › Nairo_nucleo	0.91	88.0	6.06e-01	100.0%	82.5%

D3 medium residues 71-158

PDB

Domain cluster: rep: nucleoprotein__YP_009551659__Great_Saltee_virus__1810946__D96-157

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02477.21 best	Nairo_nucleo	89.3	3.60e-25	100.0%	19.2%

D4 medium residues 387-414_444-481

PDB

Domain cluster: representative