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nucleocapsid_protein
Euk-VirHuman_coronavirus_229E
nucleocapsid_protein__NP_073556__Human_coronavirus_229E__11137
Identity
- Accession:
- NP_073556 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
Human_coronavirus_229E
TaxID: 11137
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-139
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 151.8 | 3.70e-44 | 100.0% | 32.9% |
D2
medium
residues 243-340
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 125.7 | 3.30e-36 | 100.0% | 27.6% |