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nucleocapsid_protein
Euk-VirBovine_coronavirus
nucleocapsid_protein__NP_150083__Bovine_coronavirus__11128
Identity
- Accession:
- NP_150083 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
65.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Bovine_coronavirus
TaxID: 11128
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 254-318_357-375
Domain cluster:
rep: nucleocapsid_protein__NP_045302__Murine_hepatitis_virus__11138__D254-319_356-380
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 69.9 | 3.00e-19 | 90.5% | 18.6% |
D2
medium
residues 61-193
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 132.3 | 3.20e-38 | 99.2% | 36.3% |