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nucleocapsid_protein
Euk-VirMachupo_mammarenavirus
nucleocapsid_protein__NP_899213__Machupo_mammarenavirus__11628
Identity
- Accession:
- NP_899213 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
70.9
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Arenaviridae›
Mammarenavirus›
Mammarenavirus_machupoense
TaxID: 11628
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 358-503_520-554
Domain cluster:
rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17290.9 best | Arena_ncap_C | 264.9 | 3.70e-79 | 91.7% | 96.7% |
D2
medium
residues 1-143_168-215
Domain cluster:
rep: nucleoprotein__YP_006858707__Lunk_virus_NKS-1__1134579__D27-82_171-257
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00843.23 best | Arena_nucleocap | 210.1 | 6.00e-62 | 73.3% | 42.2% |
| PF00843.23 | Arena_nucleocap | 86.3 | 2.70e-24 | 26.7% | 15.0% |