←Back to structures

nucleocapsid_protein

Euk-Vir

Seoul_orthohantavirus

nucleocapsid_protein__NP_942556__Seoul_orthohantavirus__1980490

Identity

Accession:
NP_942556 ↗
Protein ID:
nucleocapsid_protein
Kingdom:
euk

Quality

83.2 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Hantaviridae› Orthohantavirus› Orthohantavirus_seoulense

TaxID: 1980490

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-67
PDB
Domain cluster: rep: nucleocapsid_protein__YP_009362056__Cao_Bang_orthohantavirus__1980464__D1-71
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00846.25 best Hanta_nucleocap 29.5 5.00e-07 100.0% 14.8%
D2 medium residues 116-211
PDB
Domain cluster: rep: nucleocapsid_protein__YP_001911121__Thottopalayam_virus__1980493__D127-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00846.25 best Hanta_nucleocap 154.6 5.60e-45 100.0% 22.5%
D3 medium residues 212-311
PDB
Domain cluster: rep: nucleocapsid_protein__YP_009361844__Jeju_virus__990280__D216-309
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00846.25 best Hanta_nucleocap 67.2 1.80e-18 100.0% 22.7%
D4 medium residues 312-427
PDB
Domain cluster: rep: nucleocapsid_protein__YP_001911121__Thottopalayam_virus__1980493__D301-430
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00846.25 best Hanta_nucleocap 219.2 1.30e-64 100.0% 27.2%