nucleocapsid_protein

Euk-Vir

Bear_Canyon_mammarenavirus

nucleocapsid_protein__YP_001649227__Bear_Canyon_mammarenavirus__192848

Identity

77.8 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Arenaviridae› Mammarenavirus› Mammarenavirus_bearense

TaxID: 192848

View cluster (26 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 361-551

PDB

Domain cluster: rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17290.9 best	Arena_ncap_C	241.3	6.30e-72	91.6%	92.8%

D2 medium residues 1-16_84-115_265-318

PDB

Domain cluster: rep: nucleoprotein__YP_006590087__CAS_virus__1223561__D1-21_80-113_255-329

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	77.9	9.70e-22	54.9%	16.5%
PF00843.23	Arena_nucleocap	30.3	3.00e-07	47.1%	13.5%

D3 medium residues 17-83_163-194_319-335

PDB

Domain cluster: rep: nucleocapsid_protein__YP_010086247__Xapuri_virus__2267561__D28-83_162-190

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	76.7	2.30e-21	59.5%	20.4%
PF00843.23	Arena_nucleocap	38.8	7.60e-10	30.2%	9.9%

D4 medium residues 195-264

PDB

Domain cluster: rep: nucleocapsid_protein__YP_010086247__Xapuri_virus__2267561__D191-255

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	121.1	7.20e-35	100.0%	21.0%