←Back to structures
nucleocapsid_protein
Euk-VirBat_coronavirus_1A
nucleocapsid_protein__YP_001718609__Bat_coronavirus_1A__393767
Identity
- Accession:
- YP_001718609 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
69.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Alphacoronavirus›
Bat_coronavirus_1A
TaxID: 393767
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-138
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 155.8 | 2.30e-45 | 100.0% | 33.1% |
D2
medium
residues 235-331
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 120.4 | 1.30e-34 | 100.0% | 28.2% |