nucleocapsid_protein

Euk-Vir

Chapare_mammarenavirus

nucleocapsid_protein__YP_001816783__Chapare_mammarenavirus__499556

Identity

79.2 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Arenaviridae› Mammarenavirus› Mammarenavirus_chapareense

TaxID: 499556

View cluster (26 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 360-507_519-552

PDB

Domain cluster: rep: nucleoprotein__YP_010086252__Dante_Muikkunen_virus_1__2447916__D386-583

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17290.9 best	Arena_ncap_C	259.9	1.30e-77	91.8%	96.1%

D2 medium residues 5-27_89-131_258-335

PDB

Domain cluster: rep: nucleoprotein__YP_006590087__CAS_virus__1223561__D1-21_80-113_255-329

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	141.6	4.10e-41	56.2%	23.6%
PF00843.23	Arena_nucleocap	43.9	2.10e-11	32.6%	13.2%

D3 medium residues 28-88_164-189

PDB

Domain cluster: rep: nucleocapsid_protein__YP_010086247__Xapuri_virus__2267561__D28-83_162-190

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	80.8	1.30e-22	73.6%	18.3%
PF00843.23	Arena_nucleocap	28.2	1.30e-06	31.0%	7.2%

D4 medium residues 190-257

PDB

Domain cluster: rep: nucleocapsid_protein__YP_010086247__Xapuri_virus__2267561__D191-255

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00843.23 best	Arena_nucleocap	109.6	2.20e-31	100.0%	20.4%