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nucleocapsid_protein
Euk-VirWhite-eye_coronavirus_HKU16
nucleocapsid_protein__YP_005352842__White-eye_coronavirus_HKU16__1159907
Identity
- Accession:
- YP_005352842 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Deltacoronavirus›
White-eye_coronavirus_HKU16
TaxID: 1159907
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 200-284
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 96.0 | 3.70e-27 | 100.0% | 24.4% |
D2
medium
residues 1-143
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 159.2 | 2.10e-46 | 99.3% | 37.8% |