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nucleocapsid_protein
Euk-VirSparrow_coronavirus_HKU17
nucleocapsid_protein__YP_005352850__Sparrow_coronavirus_HKU17__1159906
Identity
- Accession:
- YP_005352850 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Deltacoronavirus›
Sparrow_coronavirus_HKU17
TaxID: 1159906
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 200-284
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 103.1 | 2.50e-29 | 100.0% | 24.4% |
D2
medium
residues 4-142
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 160.5 | 8.90e-47 | 100.0% | 37.2% |