←Back to structures
nucleocapsid_protein
Euk-VirMagpie-robin_coronavirus_HKU18
nucleocapsid_protein__YP_005352858__Magpie-robin_coronavirus_HKU18__1159903
Identity
- Accession:
- YP_005352858 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Deltacoronavirus›
Magpie-robin_coronavirus_HKU18
TaxID: 1159903
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 200-287
Domain cluster:
rep: nucleocapsid_protein__YP_005352875__Wigeon_coronavirus_HKU20__1159908__D197-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 102.6 | 3.40e-29 | 100.0% | 25.0% |
D2
medium
residues 6-142
Domain cluster:
rep: nucleoprotein__YP_009199247__Swine_enteric_coronavirus__1766554__D39-151
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00937.24 best | CoV_nucleocap | 154.1 | 7.80e-45 | 100.0% | 36.6% |