nucleocapsid_protein

Euk-Vir

Nariva_virus

nucleocapsid_protein__YP_006347582__Nariva_virus__590647

Identity

74.4 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Narmovirus› Nariva_virus

TaxID: 590647

View cluster (62 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-139

PDB

Domain cluster: rep: nucleocapsid_protein__YP_009177597__Phocine_morbillivirus__11240__D32-140

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00973.26 best	Paramyxo_ncap	107.6	1.00e-30	100.0%	26.5%

D2 medium residues 140-261

PDB

Domain cluster: rep: nucleocapsid_protein__YP_009512957__Feline_morbillivirus__1170234__D152-264

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00973.26 best	Paramyxo_ncap	163.1	1.40e-47	100.0%	30.2%

D3 medium residues 262-318

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00973.26 best	Paramyxo_ncap	101.8	6.10e-29	100.0%	14.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1n93X02	1.10.3050.10	Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2	0.78	65.0	5.05e-01	94.7%	43.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2756727	566.1.1.1 ↗	alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Paramyxo_ncap	0.97	92.0	5.33e-01	100.0%	14.5%

D4 medium residues 319-397

PDB

Domain cluster: rep: nucleocapsid_protein__YP_007008147__Avian_paramyxovirus_4__28274__D321-390

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00973.26 best	Paramyxo_ncap	127.8	7.50e-37	100.0%	19.8%