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nucleocapsid_protein
Euk-VirPersimmon_virus_A
nucleocapsid_protein__YP_006576501__Persimmon_virus_A__1211480
Identity
- Accession:
- YP_006576501 ↗
- Protein ID:
- nucleocapsid_protein
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Alphacytorhabdovirus›
Persimmon_virus_A
TaxID: 1211480
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 79-301
Domain cluster:
rep: N_protein__YP_010086409__Maize_yellow_striate_virus__1168550__D39-103_154-262
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 75.9 | 5.10e-21 | 100.0% | 64.3% |
D2
medium
residues 63-74_306-450
Domain cluster:
rep: nucleocapsid_protein__YP_010087150__Cytorhabdovirus_caricae__2364291__D277-416_434-447
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03216.19 best | Rhabdo_ncap_2 | 75.0 | 9.70e-21 | 61.8% | 31.3% |